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Welcome to the documentation for PyGOM

Getting started

Installation
Building the documentation locally

Compartmental models

Introduction
Mathematical description

PyGOM workflow

Defining a system of differential equations
ODE Insights
- Extracting model information
- Deducing transitions from equations
Producing forecasts
Parameter fitting
Reading and using EpiJSON data

Common biological compartmental models

Pre-defined examples - common epi models

Frequently asked questions

Frequently asked questions

Code documentation

model
loss
approximate_bayesian_computation
utilR

References

Bibliography

Repository
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